AI Eyes are normally pretty uncommon unless you're playing against turtle-type AI's or higher difficulty AI's. If you have trouble dealing with AI eyes, the major problems you'll be having are spire shield guard posts. However, note that spire shield guard posts will self-destruct when there is no longer any unit under them, so make use of that. They also have a lot less HP than they used to, so they aren't too difficult to destroy with a bunch of bombers or bomber starships.
Other ways to deal with them are by using ships that can overpower the zombie ships that the AI eye spawns. Namely, by using a hive golem with full wasps. Note that this strategy doesn't work as well if the planet is a Mark IV planet, because then the ships are going to be too powerful for the wasps to deal with easily.
Lastly, you could pick a bonus ship type that is able to quickly strike guard posts one after another. One of my favorite bonus ship types, teleport raiders, does this job extremely well. Just get a bunch of teleport raiders, plop them next to a guard post and destroy it. Wash, rinse, repeat with all the rest.
There's almost no way to avoid extensive micro when dealing with AI eyes. There just aren't many other options except siccing a full hive golem on it or nuking it, really.
